Write copy number estimation results to BED file format.

Format copy number estimation output to BED file format.

cn2bed(
  cn.pred,
  type = "solo",
  filename = "copy_number_est",
  sep = "\t",
  output = NULL
)

Arguments

cn.pred	`data.frame` object returned by `ltr.cn` (if `type = "solo"`).
type	type of copy number estimation: `ltr.cn` (if `type = "solo"`).
filename	name of the output file (will be extended by "*.csv").
sep	column separator.
output	path in which the output file shall be stored.

Hajk-Georg Drost